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File:HIV-SIV-phylogenetic-tree.svg

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Summary

Description
English: Phylogenetic Tree of the SIV and HIV viruses.
  • Viruses Depicted in HIV-SIV Phylogenetic Tree
  • Human
    HIV-1 M (Main) group, including reference strains from subtypes A-J. Group M is responsible for the pandemic.
    HIV-1 O (Outlier) group, most commonly found in West Africa
    HIV-1 N (Not-M, Not-O) group, found in a very small number of individuals in West Africa
    HIV-1 M group reference strains: A_UG.U455, A_KE.Q2317, B_US.JRFL, B_US.WEAU160, C_ET.ETH2220, C_IN.21068, D_ZR.NDK, D_ZR.ELI, F_FI.FIN6393, F_BE.VI850, G_SE.SE6165, G_BE.DRCBL, H_CF.90CF056, H_BE.VI997, J_SE.SE91733, J_SE.SE92809, and CRF01 AE_CF.90CF402 and AE_TH.CM240, which are subtype A in pol.
    HIV-1 N group: N_CM.YBF30
    HIV-1 O group: O_CM.ANT70, O_CM.MVP5180
    HIV-2 subtypes A and B: H2A_DE.BEN, H2A_SN.ST, H2B_GH.D205, and H2B_CI.EHO
  • Simian
    SIVcpz from chimpanzee Pan troglodytes troglodytes (P.t.t.):
    SIVcpz.GAB, SIVcpz.US, and SIVcpz.Cam3
    SIVcpz from chimpanzee Pan troglodytes shweinfuthii (P.t.s.): SIVcpz.ANT
    SIV African Green Monkey (SIVagm):
    Tantalus (TAN): SIVagm.TAN1
    Vervet (VER): SIVagm.VERTYO, SIVagm.VERAGM3, SIVagm.VER9063, SIVagm.VER155
    Grivet (GRI): SIVagm.GRI677
    Sabaeus (SAB): SIVagm.SAB1C
    SIV Sooty Mangaby (SIVsm) (also found in captive macaques): SIVsm.mac251, SIVsm.smm9
    SIV L’hoest: SIV.LHOEST
    SIV Mandrill: SIV.MNDGB1
    SIV Sun: SIV.SUN
Date
Source

Theoretical Biology and Biophysics Group, Los Alamos National Laboratory.

Author Kuiken, C., Foley, B., Hahn, B., Marx, P., McCutchan, F., Mellors, J. W., Mullins, J., Wolinsky, S. & Korber, B. (1999). A compilation and analysis of nucleic acid and amino acid sequences. In Human Retroviruses and AIDS. Los Alamos, New Mexico: Theoretical Biology and Biophysics Group, Los Alamos National Laboratory.
Other versions File:HIV-SIV-phylogenetic-tree.png (PNG Version)
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Licensing

Public domain This image is a work of a United States Department of Energy (or predecessor organization) employee, taken or made as part of that person's official duties. As a work of the U.S. federal government, the image is in the public domain.

Please note that national laboratories operate under varying licences and some are not free. Check the site policies of any national lab before crediting it with this tag.

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current20:52, 20 April 2008Thumbnail for version as of 20:52, 20 April 2008518 × 446 (304 KB)Scray'''Source:''' Theoretical Biology and Biophysics Group, Los Alamos National Laboratory. '''Cite:''' Kuiken, C., Foley, B., Hahn, B., Marx, P., McCutchan, F., Mellors, J. W., Mullins, J., Wolinsky, S. & Korber, B. (1999). A compilation and analysis of nu

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